IntraPS
From Byobu
 IntraPS on Linux |
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| Developer(s) | Stephan Pauw, Petra van Berkel, Peter van Rijn, Serrano Pereira |
|---|---|
| Stable release | 1.2.1 / 2010-02-23 |
| Written in | Python |
| Operating system | Cross-platform |
| Development status | Unmaintained |
| Type | Bioinformatics |
IntraPS is a tool for removing intraspecific variation from molecular datasets in the form of multiple sequence alignments. It's been developed by bioinformatics students at the Leiden University of Applied Science, The Netherlands. This tool was developed as a part of a school project. It's a nice example to what bioinformaticians can do with their programming skills in finding answers to biological questions.
Contents |
Requirements
Installation
IntraPS doesn’t need to be installed. Follow these simple steps to get started:
- First make sure you have all the above requirements.
- Extract the .zip or .tar.gz file to a preferred folder.
- A new folder (IntraPS-x.x) will be created.
- Run intraps.pyw from this folder by double clicking on it.
Download
Changelog
Version 1.2
- FIX: Accession numbers were missing from the job report when the input is a Clustal alignment file.
- FIX: The help button did not work in Linux.
- CHG: Display a static toolbar if IntraPS is not running on Windows.
Version 1.1
- NEW: Display a progress dialog when headers are being downloaded from GenBank. This also allows the user to abort the download progress if it’s taking too long.
- FIX: Changing working directory to the current working directory in Linux. Fixes the issue where the relative paths to the bitmaps wouldn’t work.
- CHG: Automatically disable the toolbar when IntraPS is running on Linux or MacOS. The toolbar looks really ugly on these systems.
